For instance, the Civ games are basically Whig History: The Game, presenting liberal capitalism as the ideal end point for all societies. It even includes uncivilized "barbarian tribes" whose sole purpose is to be exterminated so you can take their land for the glory of capitalism.
ff7 starts you of as a group of eco terrorists and then goes off into more standard jrpg stuff, but that beginning makes it a lot more palatable